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Biomedical Imaging Research Unit
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Resources and links
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Digital imaging
Biomedical Imaging Research Unit
Image processing/analysis - online learning
Image.sc forum - contributors list of recommended resources for Bioimage analysis
EPFL MOOC - image processing and analysis
Cornell University Institute of Biotechnology - ImageJ scripting tutorial
NEUBIAS Academy - training in Bioimage analysis
Open source software
- ImageJ: for image analysis and image processing
- Fiji - version of ImageJ with additional plugins built-in plus more support for scripting
- Cell Profiler - for analysing cell images
- BioImageXD: for 3D volume and surface rendering
- Icy - bioimage analysis
- ilastik - interactive machine learning
- QuPath - software for whole slide viewer and analysis
- Irfanview
- OMERO - open source database
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SCHOOLS, DEPARTMENTS AND CENTRES